! HADDOCK Ambiguous Interaction Restraints (AIR) for the GP120-CD4 complex
! Dominguez et al.
!
! The AIR format corresponds to the CNS distance restraints
!
! AIRS from GP120 to CD4
!
assign (resid 368 and segid A) (
        (resid 27 and segid B) or
        (resid 29 and segid B) or
        (resid 33 and segid B) or
        (resid 34 and segid B) or
        (resid 35 and segid B) or
        (resid 40 and segid B) or
        (resid 42 and segid B) or
        (resid 43 and segid B) or
        (resid 44 and segid B) or
        (resid 45 and segid B) or
        (resid 46 and segid B) or
        (resid 47 and segid B) or
        (resid 48 and segid B) or
        (resid 52 and segid B) or
        (resid 53 and segid B) or
        (resid 56 and segid B) or
        (resid 59 and segid B) or
        (resid 60 and segid B)) 3.0 3.0 0.0
assign (resid 370 and segid A) (
        (resid 27 and segid B) or
        (resid 29 and segid B) or
        (resid 33 and segid B) or
        (resid 34 and segid B) or
        (resid 35 and segid B) or
        (resid 40 and segid B) or
        (resid 42 and segid B) or
        (resid 43 and segid B) or
        (resid 44 and segid B) or
        (resid 45 and segid B) or
        (resid 46 and segid B) or
        (resid 47 and segid B) or
        (resid 48 and segid B) or
        (resid 52 and segid B) or
        (resid 53 and segid B) or
        (resid 56 and segid B) or
        (resid 59 and segid B)) 3.0 3.0 0.0
assign (resid 427 and segid A) (
        (resid 27 and segid B) or
        (resid 29 and segid B) or
        (resid 33 and segid B) or
        (resid 34 and segid B) or
        (resid 35 and segid B) or
        (resid 40 and segid B) or
        (resid 42 and segid B) or
        (resid 43 and segid B) or
        (resid 44 and segid B) or
        (resid 45 and segid B) or
        (resid 46 and segid B) or
        (resid 47 and segid B) or
        (resid 48 and segid B) or
        (resid 52 and segid B) or
        (resid 53 and segid B) or
        (resid 56 and segid B) or
        (resid 59 and segid B)) 3.0 3.0 0.0
assign (resid 457 and segid A) (
        (resid 27 and segid B) or
        (resid 29 and segid B) or
        (resid 33 and segid B) or
        (resid 34 and segid B) or
        (resid 35 and segid B) or
        (resid 40 and segid B) or
        (resid 42 and segid B) or
        (resid 43 and segid B) or
        (resid 44 and segid B) or
        (resid 45 and segid B) or
        (resid 46 and segid B) or
        (resid 47 and segid B) or
        (resid 48 and segid B) or
        (resid 52 and segid B) or
        (resid 53 and segid B) or
        (resid 56 and segid B) or
        (resid 59 and segid B)) 3.0 3.0 0.0
!
! AIRS from CD4 to GP120
!
assign (resid 29 and segid B) (
        (resid 109 and segid A) or
        (resid 280 and segid A) or
        (resid 281 and segid A) or
        (resid 362 and segid A) or
        (resid 365 and segid A) or
        (resid 367 and segid A) or
        (resid 368 and segid A) or
        (resid 370 and segid A) or
        (resid 371 and segid A) or
        (resid 425 and segid A) or
        (resid 427 and segid A) or
        (resid 429 and segid A) or
        (resid 430 and segid A) or
        (resid 455 and segid A) or
        (resid 457 and segid A) or
        (resid 459 and segid A) or
        (resid 467 and segid A) or
        (resid 469 and segid A) or
        (resid 471 and segid A) or
        (resid 472 and segid A) or
        (resid 473 and segid A) or
        (resid 474 and segid A) or
        (resid 476 and segid A)) 3.0 3.0 0.0
assign (resid 35 and segid B) (
        (resid 109 and segid A) or
        (resid 280 and segid A) or
        (resid 281 and segid A) or
        (resid 362 and segid A) or
        (resid 365 and segid A) or
        (resid 367 and segid A) or
        (resid 368 and segid A) or
        (resid 370 and segid A) or
        (resid 371 and segid A) or
        (resid 425 and segid A) or
        (resid 427 and segid A) or
        (resid 429 and segid A) or
        (resid 430 and segid A) or
        (resid 455 and segid A) or
        (resid 457 and segid A) or
        (resid 459 and segid A) or
        (resid 467 and segid A) or
        (resid 469 and segid A) or
        (resid 471 and segid A) or
        (resid 472 and segid A) or
        (resid 473 and segid A) or
        (resid 474 and segid A) or
        (resid 476 and segid A)) 3.0 3.0 0.0
assign (resid 43 and segid B) (
        (resid 109 and segid A) or
        (resid 280 and segid A) or
        (resid 281 and segid A) or
        (resid 362 and segid A) or
        (resid 365 and segid A) or
        (resid 367 and segid A) or
        (resid 368 and segid A) or
        (resid 370 and segid A) or
        (resid 371 and segid A) or
        (resid 425 and segid A) or
        (resid 427 and segid A) or
        (resid 429 and segid A) or
        (resid 430 and segid A) or
        (resid 455 and segid A) or
        (resid 457 and segid A) or
        (resid 459 and segid A) or
        (resid 467 and segid A) or
        (resid 469 and segid A) or
        (resid 471 and segid A) or
        (resid 472 and segid A) or
        (resid 473 and segid A) or
        (resid 474 and segid A) or
        (resid 476 and segid A)) 3.0 3.0 0.0
assign (resid 44 and segid B) (
        (resid 109 and segid A) or
        (resid 280 and segid A) or
        (resid 281 and segid A) or
        (resid 362 and segid A) or
        (resid 365 and segid A) or
        (resid 367 and segid A) or
        (resid 368 and segid A) or
        (resid 370 and segid A) or
        (resid 371 and segid A) or
        (resid 425 and segid A) or
        (resid 427 and segid A) or
        (resid 429 and segid A) or
        (resid 430 and segid A) or
        (resid 455 and segid A) or
        (resid 457 and segid A) or
        (resid 459 and segid A) or
        (resid 467 and segid A) or
        (resid 469 and segid A) or
        (resid 471 and segid A) or
        (resid 472 and segid A) or
        (resid 473 and segid A) or
        (resid 474 and segid A) or
        (resid 476 and segid A)) 3.0 3.0 0.0
assign (resid 46 and segid B) (
        (resid 109 and segid A) or
        (resid 280 and segid A) or
        (resid 281 and segid A) or
        (resid 362 and segid A) or
        (resid 365 and segid A) or
        (resid 367 and segid A) or
        (resid 368 and segid A) or
        (resid 370 and segid A) or
        (resid 371 and segid A) or
        (resid 425 and segid A) or
        (resid 427 and segid A) or
        (resid 429 and segid A) or
        (resid 430 and segid A) or
        (resid 455 and segid A) or
        (resid 457 and segid A) or
        (resid 459 and segid A) or
        (resid 467 and segid A) or
        (resid 469 and segid A) or
        (resid 471 and segid A) or
        (resid 472 and segid A) or
        (resid 473 and segid A) or
        (resid 474 and segid A) or
        (resid 476 and segid A)) 3.0 3.0 0.0
assign (resid 47 and segid B) (
        (resid 109 and segid A) or
        (resid 280 and segid A) or
        (resid 281 and segid A) or
        (resid 362 and segid A) or
        (resid 365 and segid A) or
        (resid 367 and segid A) or
        (resid 368 and segid A) or
        (resid 370 and segid A) or
        (resid 371 and segid A) or
        (resid 425 and segid A) or
        (resid 427 and segid A) or
        (resid 429 and segid A) or
        (resid 430 and segid A) or
        (resid 455 and segid A) or
        (resid 457 and segid A) or
        (resid 459 and segid A) or
        (resid 467 and segid A) or
        (resid 469 and segid A) or
        (resid 471 and segid A) or
        (resid 472 and segid A) or
        (resid 473 and segid A) or
        (resid 474 and segid A) or
        (resid 476 and segid A)) 3.0 3.0 0.0
assign (resid 59 and segid B) (
        (resid 109 and segid A) or
        (resid 280 and segid A) or
        (resid 281 and segid A) or
        (resid 362 and segid A) or
        (resid 365 and segid A) or
        (resid 367 and segid A) or
        (resid 368 and segid A) or
        (resid 370 and segid A) or
        (resid 371 and segid A) or
        (resid 425 and segid A) or
        (resid 427 and segid A) or
        (resid 429 and segid A) or
        (resid 430 and segid A) or
        (resid 455 and segid A) or
        (resid 457 and segid A) or
        (resid 459 and segid A) or
        (resid 467 and segid A) or
        (resid 469 and segid A) or
        (resid 471 and segid A) or
        (resid 472 and segid A) or
        (resid 473 and segid A) or
        (resid 474 and segid A) or
        (resid 476 and segid A)) 3.0 3.0 0.0