AA-EqSet - The equivalence set of the flanking amino acids (X denotes ant amino acid). Pos(m) - the region of the cleavage site in the peptide ( 0 - first fifth, 4 - last fifth). TABELE: Prob(y | AA-EqSet , Pos(m) ) AA-EqSet Pos(m) y Prob Log Prob 1 X-X 0 zero 0.458681 -0.779 2 X-X 0 low 0.273125 -1.298 3 X-X 0 medium 0.161079 -1.826 4 X-X 0 high 0.107114 -2.234 5 X-X 1 zero 0.070448 -2.653 6 X-X 1 low 0.160966 -1.827 7 X-X 1 medium 0.297959 -1.211 8 X-X 1 high 0.470627 -0.754 9 X-X 2 zero 0.097839 -2.324 10 X-X 2 low 0.035888 -3.327 11 X-X 2 medium 0.357769 -1.028 12 X-X 2 high 0.508503 -0.676 13 X-X 3 zero 0.190862 -1.656 14 X-X 3 low 0.250692 -1.384 15 X-X 3 medium 0.374559 -0.982 16 X-X 3 high 0.183886 -1.693 17 X-X 4 zero 0.271072 -1.305 18 X-X 4 low 0.554150 -0.590 19 X-X 4 medium 0.157363 -1.849 20 X-X 4 high 0.017411 -4.051 21 P-X 0 zero 0.236733 -1.441 22 P-X 0 low 0.349772 -1.050 23 P-X 0 medium 0.230968 -1.465 24 P-X 0 high 0.182523 -1.701 25 P-X 1 zero 0.362376 -1.015 26 P-X 1 low 0.352237 -1.043 27 P-X 1 medium 0.220090 -1.514 28 P-X 1 high 0.065294 -2.729 29 P-X 2 zero 0.545126 -0.607 30 P-X 2 low 0.229849 -1.470 31 P-X 2 medium 0.211109 -1.555 32 P-X 2 high 0.013914 -4.275 33 P-X 3 zero 0.703379 -0.352 34 P-X 3 low 0.179798 -1.716 35 P-X 3 medium 0.103055 -2.272 36 P-X 3 high 0.013766 -4.286 37 P-X 4 zero 0.587032 -0.533 38 P-X 4 low 0.313369 -1.160 39 P-X 4 medium 0.068184 -2.686 40 P-X 4 high 0.031408 -3.461 41 X-P 0 zero 0.173379 -1.752 42 X-P 0 low 0.234624 -1.450 43 X-P 0 medium 0.325891 -1.121 44 X-P 0 high 0.266103 -1.324 45 X-P 1 zero 0.010652 -4.542 46 X-P 1 low 0.005394 -5.222 47 X-P 1 medium 0.090535 -2.402 48 X-P 1 high 0.893417 -0.113 49 X-P 2 zero 0.023630 -3.745 50 X-P 2 low 0.009482 -4.658 51 X-P 2 medium 0.054916 -2.902 52 X-P 2 high 0.911970 -0.092 53 X-P 3 zero 0.026410 -3.634 54 X-P 3 low 0.021293 -3.849 55 X-P 3 medium 0.264585 -1.330 56 X-P 3 high 0.687710 -0.374 57 X-P 4 zero 0.117587 -2.141 58 X-P 4 low 0.332900 -1.100 59 X-P 4 medium 0.320891 -1.137 60 X-P 4 high 0.228615 -1.476 61 G-X 0 zero 0.585854 -0.535 62 G-X 0 low 0.281505 -1.268 63 G-X 0 medium 0.060215 -2.810 64 G-X 0 high 0.072424 -2.625 65 G-X 1 zero 0.167034 -1.790 66 G-X 1 low 0.282167 -1.265 67 G-X 1 medium 0.433719 -0.835 68 G-X 1 high 0.117080 -2.145 69 G-X 2 zero 0.282209 -1.265 70 G-X 2 low 0.164053 -1.808 71 G-X 2 medium 0.433120 -0.837 72 G-X 2 high 0.120618 -2.115 73 G-X 3 zero 0.481827 -0.730 74 G-X 3 low 0.286780 -1.249 75 G-X 3 medium 0.213057 -1.546 76 G-X 3 high 0.018334 -3.999 77 G-X 4 zero 0.634306 -0.455 78 G-X 4 low 0.310565 -1.169 79 G-X 4 medium 0.033478 -3.397 80 G-X 4 high 0.021646 -3.833 81 X-G 0 zero 0.338548 -1.083 82 X-G 0 low 0.244343 -1.409 83 X-G 0 medium 0.174875 -1.744 84 X-G 0 high 0.242232 -1.418 85 X-G 1 zero 0.043892 -3.126 86 X-G 1 low 0.099198 -2.311 87 X-G 1 medium 0.259108 -1.351 88 X-G 1 high 0.597801 -0.514 89 X-G 2 zero 0.042897 -3.149 90 X-G 2 low 0.019536 -3.935 91 X-G 2 medium 0.209715 -1.562 92 X-G 2 high 0.727850 -0.318 93 X-G 3 zero 0.077885 -2.553 94 X-G 3 low 0.160085 -1.832 95 X-G 3 medium 0.427646 -0.849 96 X-G 3 high 0.334382 -1.095 97 X-G 4 zero 0.193592 -1.642 98 X-G 4 low 0.541414 -0.614 99 X-G 4 medium 0.228853 -1.475 100 X-G 4 high 0.036136 -3.320 101 R/K-X 0 zero 0.497808 -0.698 102 R/K-X 0 low 0.249350 -1.389 103 R/K-X 0 medium 0.124193 -2.086 104 R/K-X 0 high 0.128636 -2.051 105 R/K-X 1 zero 0.172579 -1.757 106 R/K-X 1 low 0.151778 -1.885 107 R/K-X 1 medium 0.292987 -1.228 108 R/K-X 1 high 0.382648 -0.961 109 R/K-X 2 zero 0.145254 -1.929 110 R/K-X 2 low 0.175935 -1.738 111 R/K-X 2 medium 0.161100 -1.826 112 R/K-X 2 high 0.517701 -0.658 113 R/K-X 3 zero 0.202350 -1.598 114 R/K-X 3 low 0.253929 -1.371 115 R/K-X 3 medium 0.347075 -1.058 116 R/K-X 3 high 0.196641 -1.626 117 R/K-X 4 zero 0.173047 -1.754 118 R/K-X 4 low 0.644478 -0.439 119 R/K-X 4 medium 0.160970 -1.827 120 R/K-X 4 high 0.021503 -3.840 121 H-X 0 zero 0.177476 -1.729 122 H-X 0 low 0.196103 -1.629 123 H-X 0 medium 0.365668 -1.006 124 H-X 0 high 0.260747 -1.344 125 H-X 1 zero 0.072627 -2.622 126 H-X 1 low 0.073262 -2.614 127 H-X 1 medium 0.330550 -1.107 128 H-X 1 high 0.523556 -0.647 129 H-X 2 zero 0.040255 -3.213 130 H-X 2 low 0.109340 -2.213 131 H-X 2 medium 0.280512 -1.271 132 H-X 2 high 0.569888 -0.562 133 H-X 3 zero 0.065644 -2.724 134 H-X 3 low 0.366363 -1.004 135 H-X 3 medium 0.457957 -0.781 136 H-X 3 high 0.110030 -2.207 137 H-X 4 zero 0.171245 -1.765 138 H-X 4 low 0.607904 -0.498 139 H-X 4 medium 0.151192 -1.889 140 H-X 4 high 0.069644 -2.664 141 X-H 0 zero 0.510201 -0.673 142 X-H 0 low 0.301902 -1.198 143 X-H 0 medium 0.127382 -2.061 144 X-H 0 high 0.060507 -2.805 145 X-H 1 zero 0.047454 -3.048 146 X-H 1 low 0.108214 -2.224 147 X-H 1 medium 0.294909 -1.221 148 X-H 1 high 0.549420 -0.599 149 X-H 2 zero 0.044525 -3.112 150 X-H 2 low 0.014876 -4.208 151 X-H 2 medium 0.370870 -0.992 152 X-H 2 high 0.569725 -0.563 153 X-H 3 zero 0.106748 -2.237 154 X-H 3 low 0.153566 -1.874 155 X-H 3 medium 0.484268 -0.725 156 X-H 3 high 0.255413 -1.365 157 X-H 4 zero 0.215404 -1.535 158 X-H 4 low 0.220199 -1.513 159 X-H 4 medium 0.386379 -0.951 160 X-H 4 high 0.177980 -1.726 161 D/E-X 0 zero 0.583445 -0.539 162 D/E-X 0 low 0.274019 -1.295 163 D/E-X 0 medium 0.103946 -2.264 164 D/E-X 0 high 0.038588 -3.255 165 D/E-X 1 zero 0.069054 -2.673 166 D/E-X 1 low 0.188641 -1.668 167 D/E-X 1 medium 0.372070 -0.989 168 D/E-X 1 high 0.370234 -0.994 169 D/E-X 2 zero 0.069121 -2.672 170 D/E-X 2 low 0.059026 -2.830 171 D/E-X 2 medium 0.373681 -0.984 172 D/E-X 2 high 0.498171 -0.697 173 D/E-X 3 zero 0.107090 -2.234 174 D/E-X 3 low 0.208210 -1.569 175 D/E-X 3 medium 0.483459 -0.727 176 D/E-X 3 high 0.201241 -1.603 177 D/E-X 4 zero 0.241441 -1.421 178 D/E-X 4 low 0.491789 -0.710 179 D/E-X 4 medium 0.205463 -1.582 180 D/E-X 4 high 0.061305 -2.792 181 X-D/E 0 zero 0.377280 -0.975 182 X-D/E 0 low 0.334377 -1.095 183 X-D/E 0 medium 0.200256 -1.608 184 X-D/E 0 high 0.088085 -2.429 185 X-D/E 1 zero 0.060835 -2.800 186 X-D/E 1 low 0.133299 -2.015 187 X-D/E 1 medium 0.370433 -0.993 188 X-D/E 1 high 0.435432 -0.831 189 X-D/E 2 zero 0.077389 -2.559 190 X-D/E 2 low 0.069909 -2.661 191 X-D/E 2 medium 0.346838 -1.059 192 X-D/E 2 high 0.505864 -0.681 193 X-D/E 3 zero 0.184932 -1.688 194 X-D/E 3 low 0.263517 -1.334 195 X-D/E 3 medium 0.395285 -0.928 196 X-D/E 3 high 0.156265 -1.856 197 X-D/E 4 zero 0.335678 -1.092 198 X-D/E 4 low 0.499843 -0.693 199 X-D/E 4 medium 0.142047 -1.952 200 X-D/E 4 high 0.022429 -3.797 201 I/L/V-X 0 zero 0.348032 -1.055 202 I/L/V-X 0 low 0.309470 -1.173 203 I/L/V-X 0 medium 0.188921 -1.666 204 I/L/V-X 0 high 0.153577 -1.874 205 I/L/V-X 1 zero 0.030733 -3.482 206 I/L/V-X 1 low 0.090218 -2.406 207 I/L/V-X 1 medium 0.279044 -1.276 208 I/L/V-X 1 high 0.600004 -0.511 209 I/L/V-X 2 zero 0.031314 -3.464 210 I/L/V-X 2 low 0.025504 -3.669 211 I/L/V-X 2 medium 0.179720 -1.716 212 I/L/V-X 2 high 0.763461 -0.270 213 I/L/V-X 3 zero 0.098337 -2.319 214 I/L/V-X 3 low 0.169849 -1.773 215 I/L/V-X 3 medium 0.439146 -0.823 216 I/L/V-X 3 high 0.292668 -1.229 217 I/L/V-X 4 zero 0.224920 -1.492 218 I/L/V-X 4 low 0.570294 -0.562 219 I/L/V-X 4 medium 0.179418 -1.718 220 I/L/V-X 4 high 0.025365 -3.674 221 X-I/L/V 0 zero 0.487503 -0.718 222 X-I/L/V 0 low 0.293101 -1.227 223 X-I/L/V 0 medium 0.143774 -1.940 224 X-I/L/V 0 high 0.075621 -2.582 225 X-I/L/V 1 zero 0.062740 -2.769 226 X-I/L/V 1 low 0.158061 -1.845 227 X-I/L/V 1 medium 0.294243 -1.223 228 X-I/L/V 1 high 0.484956 -0.724 229 X-I/L/V 2 zero 0.105084 -2.253 230 X-I/L/V 2 low 0.069045 -2.673 231 X-I/L/V 2 medium 0.333560 -1.098 232 X-I/L/V 2 high 0.492311 -0.709 233 X-I/L/V 3 zero 0.180523 -1.712 234 X-I/L/V 3 low 0.274190 -1.294 235 X-I/L/V 3 medium 0.381736 -0.963 236 X-I/L/V 3 high 0.163550 -1.811 237 X-I/L/V 4 zero 0.405866 -0.902 238 X-I/L/V 4 low 0.481136 -0.732 239 X-I/L/V 4 medium 0.102984 -2.273 240 X-I/L/V 4 high 0.010011 -4.604 241 S/T-X 0 zero 0.435517 -0.831 242 S/T-X 0 low 0.340232 -1.078 243 S/T-X 0 medium 0.111462 -2.194 244 S/T-X 0 high 0.112785 -2.182 245 S/T-X 1 zero 0.098931 -2.313 246 S/T-X 1 low 0.211800 -1.552 247 S/T-X 1 medium 0.420380 -0.867 248 S/T-X 1 high 0.268886 -1.313 249 S/T-X 2 zero 0.139255 -1.971 250 S/T-X 2 low 0.088101 -2.429 251 S/T-X 2 medium 0.429981 -0.844 252 S/T-X 2 high 0.342660 -1.071 253 S/T-X 3 zero 0.312510 -1.163 254 S/T-X 3 low 0.182450 -1.701 255 S/T-X 3 medium 0.378064 -0.973 256 S/T-X 3 high 0.126972 -2.064 257 S/T-X 4 zero 0.508952 -0.675 258 S/T-X 4 low 0.407792 -0.897 259 S/T-X 4 medium 0.030151 -3.502 260 S/T-X 4 high 0.053098 -2.936 261 X-S/T 0 zero 0.329501 -1.110 262 X-S/T 0 low 0.436716 -0.828 263 X-S/T 0 medium 0.130849 -2.034 264 X-S/T 0 high 0.102930 -2.274 265 X-S/T 1 zero 0.045649 -3.087 266 X-S/T 1 low 0.124880 -2.080 267 X-S/T 1 medium 0.417615 -0.873 268 X-S/T 1 high 0.411854 -0.887 269 X-S/T 2 zero 0.074169 -2.601 270 X-S/T 2 low 0.044640 -3.109 271 X-S/T 2 medium 0.324458 -1.126 272 X-S/T 2 high 0.556730 -0.586 273 X-S/T 3 zero 0.206056 -1.580 274 X-S/T 3 low 0.141818 -1.953 275 X-S/T 3 medium 0.454693 -0.788 276 X-S/T 3 high 0.197431 -1.622 277 X-S/T 4 zero 0.408830 -0.894 278 X-S/T 4 low 0.475111 -0.744 279 X-S/T 4 medium 0.089794 -2.410 280 X-S/T 4 high 0.026259 -3.640 281 N-X 0 zero 0.498195 -0.697 282 N-X 0 low 0.264170 -1.331 283 N-X 0 medium 0.102277 -2.280 284 N-X 0 high 0.135348 -2.000 285 N-X 1 zero 0.134553 -2.006 286 N-X 1 low 0.101386 -2.289 287 N-X 1 medium 0.465719 -0.764 288 N-X 1 high 0.298336 -1.210 289 N-X 2 zero 0.098977 -2.313 290 N-X 2 low 0.083030 -2.489 291 N-X 2 medium 0.557957 -0.583 292 N-X 2 high 0.260030 -1.347 293 N-X 3 zero 0.231131 -1.465 294 N-X 3 low 0.348414 -1.054 295 N-X 3 medium 0.313428 -1.160 296 N-X 3 high 0.107019 -2.235 297 N-X 4 zero 0.470455 -0.754 298 N-X 4 low 0.367463 -1.001 299 N-X 4 medium 0.077758 -2.554 300 N-X 4 high 0.084306 -2.473 301 X-N 0 zero 0.419438 -0.869 302 X-N 0 low 0.210047 -1.560 303 X-N 0 medium 0.196774 -1.626 304 X-N 0 high 0.173732 -1.750 305 X-N 1 zero 0.043860 -3.127 306 X-N 1 low 0.208683 -1.567 307 X-N 1 medium 0.410111 -0.891 308 X-N 1 high 0.337341 -1.087 309 X-N 2 zero 0.116745 -2.148 310 X-N 2 low 0.058556 -2.838 311 X-N 2 medium 0.330550 -1.107 312 X-N 2 high 0.494144 -0.705 313 X-N 3 zero 0.254387 -1.369 314 X-N 3 low 0.255391 -1.365 315 X-N 3 medium 0.383196 -0.959 316 X-N 3 high 0.107019 -2.235 317 X-N 4 zero 0.365191 -1.007 318 X-N 4 low 0.420094 -0.867 319 X-N 4 medium 0.130390 -2.037 320 X-N 4 high 0.084306 -2.473