Index Target Method Cluster identifiers # Identified clusters 1 ACE DOCK [6, 9, 17] 3 2 ACE ActDock [12, 13, 17, 18] 4 3 ACE ChemAxCFp [6, 8, 12, 13, 16, 17, 18] 7 4 ACE PathFp [1, 6, 8, 12, 16, 18] 6 5 ACE SphereFp [6, 8, 10, 13, 16] 5 6 ACE TopPPHist [6, 8, 9, 10, 12, 14, 16, 18] 8 7 ACE FragFp [6, 8, 9, 10, 11, 12, 14, 16, 18] 9 8 ACE Flexophore [6, 8, 10, 12, 13, 14, 16, 17] 8 9 AChE DOCK [] 0 10 AChE ActDock [11, 15] 2 11 AChE ChemAxCFp [10, 12, 14] 3 12 AChE PathFp [9, 10, 12, 14] 4 13 AChE SphereFp [5, 9, 10, 11, 12, 13, 14] 7 14 AChE TopPPHist [10, 11, 12, 14] 4 15 AChE FragFp [10, 12, 14] 3 16 AChE Flexophore [10, 12, 14] 3 17 ADA DOCK [4, 7] 2 18 ADA ActDock [] 0 19 ADA ChemAxCFp [2, 6, 8] 3 20 ADA PathFp [2, 3, 4] 3 21 ADA SphereFp [2, 3] 2 22 ADA TopPPHist [] 0 23 ADA FragFp [2, 6, 8] 3 24 ADA Flexophore [] 0 25 ALR2 DOCK [8, 9] 2 26 ALR2 ActDock [12] 1 27 ALR2 ChemAxCFp [7] 1 28 ALR2 PathFp [7] 1 29 ALR2 SphereFp [7] 1 30 ALR2 TopPPHist [7] 1 31 ALR2 FragFp [7] 1 32 ALR2 Flexophore [7] 1 33 AmpC DOCK [] 0 34 AmpC ActDock [] 0 35 AmpC ChemAxCFp [2] 1 36 AmpC PathFp [2] 1 37 AmpC SphereFp [2] 1 38 AmpC TopPPHist [2, 6] 2 39 AmpC FragFp [2] 1 40 AmpC Flexophore [2] 1 41 AR DOCK [1, 2, 3] 3 42 AR ActDock [] 0 43 AR ChemAxCFp [3] 1 44 AR PathFp [3] 1 45 AR SphereFp [3] 1 46 AR TopPPHist [3] 1 47 AR FragFp [3] 1 48 AR Flexophore [3] 1 49 CDK2 DOCK [11, 14, 19, 25] 4 50 CDK2 ActDock [] 0 51 CDK2 ChemAxCFp [3, 21, 22, 30] 4 52 CDK2 PathFp [3, 21, 22, 30] 4 53 CDK2 SphereFp [3, 16, 21, 22, 30] 5 54 CDK2 TopPPHist [7, 16, 19, 21] 4 55 CDK2 FragFp [3, 20] 2 56 CDK2 Flexophore [16, 21, 23] 3 57 COMT DOCK [] 0 58 COMT ActDock [] 0 59 COMT ChemAxCFp [] 0 60 COMT PathFp [] 0 61 COMT SphereFp [] 0 62 COMT TopPPHist [2] 1 63 COMT FragFp [] 0 64 COMT Flexophore [1] 1 65 COX-1 DOCK [4, 5] 2 66 COX-1 ActDock [] 0 67 COX-1 ChemAxCFp [3, 4] 2 68 COX-1 PathFp [3, 4] 2 69 COX-1 SphereFp [1, 4, 5] 3 70 COX-1 TopPPHist [4] 1 71 COX-1 FragFp [3, 4, 5] 3 72 COX-1 Flexophore [3, 4, 5, 7] 4 73 COX-2 DOCK [3, 7, 10, 17, 19, 27] 6 74 COX-2 ActDock [7, 10, 14, 17, 22, 40] 6 75 COX-2 ChemAxCFp [7, 17, 19, 33, 37] 5 76 COX-2 PathFp [7, 17, 33, 37] 4 77 COX-2 SphereFp [7, 17, 19, 33, 37] 5 78 COX-2 TopPPHist [7, 10, 16, 17, 22, 30, 33, 34, 39] 9 79 COX-2 FragFp [7, 17, 19] 3 80 COX-2 Flexophore [7, 10, 17, 19, 33, 34, 37] 7 81 DHFR DOCK [2, 3, 5, 8] 4 82 DHFR ActDock [1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14] 14 83 DHFR ChemAxCFp [3, 8, 9, 10, 11, 14] 6 84 DHFR PathFp [3, 8, 9, 10, 11, 12, 14] 7 85 DHFR SphereFp [3, 6, 9, 10, 11, 12, 13, 14] 8 86 DHFR TopPPHist [2, 3, 9, 14] 4 87 DHFR FragFp [3, 14] 2 88 DHFR Flexophore [1, 2, 3, 5, 6, 8, 10, 11, 14] 9 89 EGFr DOCK [5, 6, 14, 18, 26] 5 90 EGFr ActDock [2, 9, 19] 3 91 EGFr ChemAxCFp [2, 3, 4, 9, 16, 17, 18, 19, 21, 22, 23, 25, 33, 37, 39, 40] 16 92 EGFr PathFp [1, 2, 3, 4, 9, 10, 11, 13, 15, 16, 17, 19, 21, 23, 25, 39, 40] 17 93 EGFr SphereFp [2, 3, 4, 9, 13, 15, 16, 17, 19, 21, 23, 25, 28, 30, 32, 33, 34, 37, 39, 40] 20 94 EGFr TopPPHist [2, 9] 2 95 EGFr FragFp [2, 4, 9] 3 96 EGFr Flexophore [1, 2, 3, 9, 11, 13, 15, 18, 21, 25, 31, 38] 12 97 ERagonist DOCK [1, 5] 2 98 ERagonist ActDock [1, 4] 2 99 ERagonist ChemAxCFp [1, 4, 8, 9] 4 100 ERagonist PathFp [1, 4, 8, 9] 4 101 ERagonist SphereFp [1, 2, 4, 8] 4 102 ERagonist TopPPHist [1, 3] 2 103 ERagonist FragFp [1] 1 104 ERagonist Flexophore [1, 3, 4, 5, 9] 5 105 ERantagonist DOCK [2, 6, 7, 8] 4 106 ERantagonist ActDock [] 0 107 ERantagonist ChemAxCFp [2, 6, 7, 8] 4 108 ERantagonist PathFp [2, 6, 8] 3 109 ERantagonist SphereFp [2, 6, 7, 8] 4 110 ERantagonist TopPPHist [2, 6] 2 111 ERantagonist FragFp [2, 6, 8] 3 112 ERantagonist Flexophore [2, 6] 2 113 FGFr1 DOCK [] 0 114 FGFr1 ActDock [] 0 115 FGFr1 ChemAxCFp [] 0 116 FGFr1 PathFp [] 0 117 FGFr1 SphereFp [1, 3] 2 118 FGFr1 TopPPHist [] 0 119 FGFr1 FragFp [] 0 120 FGFr1 Flexophore [] 0 121 FXa DOCK [7, 10, 14, 15] 4 122 FXa ActDock [3, 7, 16] 3 123 FXa ChemAxCFp [8] 1 124 FXa PathFp [4, 8] 2 125 FXa SphereFp [7, 8, 19] 3 126 FXa TopPPHist [8] 1 127 FXa FragFp [8] 1 128 FXa Flexophore [7, 8, 12, 19] 4 129 GART DOCK [3] 1 130 GART ActDock [] 0 131 GART ChemAxCFp [] 0 132 GART PathFp [] 0 133 GART SphereFp [2] 1 134 GART TopPPHist [] 0 135 GART FragFp [] 0 136 GART Flexophore [] 0 137 GPB DOCK [2, 4] 2 138 GPB ActDock [] 0 139 GPB ChemAxCFp [1, 2, 3, 4] 4 140 GPB PathFp [1, 2, 3, 4] 4 141 GPB SphereFp [2, 4] 2 142 GPB TopPPHist [1, 2, 4] 3 143 GPB FragFp [1, 2, 3, 4, 5] 5 144 GPB Flexophore [1, 2, 4] 3 145 GR DOCK [1, 2, 3, 4] 4 146 GR ActDock [7] 1 147 GR ChemAxCFp [3, 7, 9] 3 148 GR PathFp [3, 7] 2 149 GR SphereFp [3, 7, 8, 9] 4 150 GR TopPPHist [3] 1 151 GR FragFp [3, 7, 9] 3 152 GR Flexophore [3, 7, 9] 3 153 HIVPR DOCK [] 0 154 HIVPR ActDock [] 0 155 HIVPR ChemAxCFp [] 0 156 HIVPR PathFp [] 0 157 HIVPR SphereFp [] 0 158 HIVPR TopPPHist [] 0 159 HIVPR FragFp [3] 1 160 HIVPR Flexophore [] 0 161 HIVRT DOCK [6] 1 162 HIVRT ActDock [] 0 163 HIVRT ChemAxCFp [6, 8, 15] 3 164 HIVRT PathFp [6, 8, 15] 3 165 HIVRT SphereFp [6, 8, 15] 3 166 HIVRT TopPPHist [6, 8] 2 167 HIVRT FragFp [6, 15] 2 168 HIVRT Flexophore [6, 8, 15] 3 169 HMGR DOCK [3, 4] 2 170 HMGR ActDock [1, 2, 3, 4] 4 171 HMGR ChemAxCFp [2, 3] 2 172 HMGR PathFp [2, 3] 2 173 HMGR SphereFp [2, 3] 2 174 HMGR TopPPHist [3] 1 175 HMGR FragFp [2, 3] 2 176 HMGR Flexophore [2, 3] 2 177 HSP90 DOCK [2] 1 178 HSP90 ActDock [] 0 179 HSP90 ChemAxCFp [2, 3] 2 180 HSP90 PathFp [2, 3] 2 181 HSP90 SphereFp [2, 3] 2 182 HSP90 TopPPHist [2, 3] 2 183 HSP90 FragFp [2, 3] 2 184 HSP90 Flexophore [2, 3] 2 185 InhA DOCK [] 0 186 InhA ActDock [] 0 187 InhA ChemAxCFp [6, 9, 12, 22, 23] 5 188 InhA PathFp [6, 9, 12, 21, 22, 23] 6 189 InhA SphereFp [9, 12, 22, 23] 4 190 InhA TopPPHist [12, 19, 21, 22, 23] 5 191 InhA FragFp [9, 12, 22, 23] 4 192 InhA Flexophore [9, 12, 19, 21, 22, 23] 6 193 MR DOCK [1] 1 194 MR ActDock [1] 1 195 MR ChemAxCFp [] 0 196 MR PathFp [] 0 197 MR SphereFp [] 0 198 MR TopPPHist [] 0 199 MR FragFp [] 0 200 MR Flexophore [] 0 201 NA DOCK [1] 1 202 NA ActDock [1] 1 203 NA ChemAxCFp [1, 3, 6] 3 204 NA PathFp [1, 5] 2 205 NA SphereFp [1] 1 206 NA TopPPHist [1] 1 207 NA FragFp [1, 5, 6] 3 208 NA Flexophore [1] 1 209 P38MAP DOCK [] 0 210 P38MAP ActDock [2] 1 211 P38MAP ChemAxCFp [2] 1 212 P38MAP PathFp [2] 1 213 P38MAP SphereFp [2] 1 214 P38MAP TopPPHist [] 0 215 P38MAP FragFp [2] 1 216 P38MAP Flexophore [2] 1 217 PARP DOCK [6] 1 218 PARP ActDock [6, 7] 2 219 PARP ChemAxCFp [5] 1 220 PARP PathFp [5] 1 221 PARP SphereFp [2, 5] 2 222 PARP TopPPHist [5] 1 223 PARP FragFp [2, 5] 2 224 PARP Flexophore [5, 6] 2 225 PDE5 DOCK [11] 1 226 PDE5 ActDock [] 0 227 PDE5 ChemAxCFp [1, 11] 2 228 PDE5 PathFp [1] 1 229 PDE5 SphereFp [1, 11] 2 230 PDE5 TopPPHist [1, 7] 2 231 PDE5 FragFp [1, 11] 2 232 PDE5 Flexophore [1] 1 233 PNP DOCK [1, 2] 2 234 PNP ActDock [2, 3, 4] 3 235 PNP ChemAxCFp [2, 3] 2 236 PNP PathFp [2, 3] 2 237 PNP SphereFp [1, 2, 3] 3 238 PNP TopPPHist [2, 4] 2 239 PNP FragFp [2, 3, 4] 3 240 PNP Flexophore [1, 2, 3, 4] 4 241 PPARg DOCK [] 0 242 PPARg ActDock [] 0 243 PPARg ChemAxCFp [5] 1 244 PPARg PathFp [] 0 245 PPARg SphereFp [5] 1 246 PPARg TopPPHist [] 0 247 PPARg FragFp [] 0 248 PPARg Flexophore [] 0 249 PR DOCK [] 0 250 PR ActDock [] 0 251 PR ChemAxCFp [] 0 252 PR PathFp [] 0 253 PR SphereFp [2] 1 254 PR TopPPHist [] 0 255 PR FragFp [] 0 256 PR Flexophore [2] 1 257 RXRa DOCK [1] 1 258 RXRa ActDock [1, 2, 3] 3 259 RXRa ChemAxCFp [1] 1 260 RXRa PathFp [1] 1 261 RXRa SphereFp [1] 1 262 RXRa TopPPHist [1] 1 263 RXRa FragFp [1] 1 264 RXRa Flexophore [1] 1 265 SAHH DOCK [1] 1 266 SAHH ActDock [1] 1 267 SAHH ChemAxCFp [1] 1 268 SAHH PathFp [1] 1 269 SAHH SphereFp [1] 1 270 SAHH TopPPHist [1] 1 271 SAHH FragFp [1] 1 272 SAHH Flexophore [1] 1 273 SRC DOCK [] 0 274 SRC ActDock [7] 1 275 SRC ChemAxCFp [] 0 276 SRC PathFp [] 0 277 SRC SphereFp [7] 1 278 SRC TopPPHist [17] 1 279 SRC FragFp [] 0 280 SRC Flexophore [] 0 281 TK DOCK [] 0 282 TK ActDock [] 0 283 TK ChemAxCFp [2] 1 284 TK PathFp [2] 1 285 TK SphereFp [2, 4] 2 286 TK TopPPHist [2] 1 287 TK FragFp [2] 1 288 TK Flexophore [2, 6] 2 289 trypsin DOCK [] 0 290 trypsin ActDock [] 0 291 trypsin ChemAxCFp [] 0 292 trypsin PathFp [] 0 293 trypsin SphereFp [] 0 294 trypsin TopPPHist [] 0 295 trypsin FragFp [] 0 296 trypsin Flexophore [] 0