Quantum-Chemical
Predictions of pKa’s of Thiols
in DMSO
Posted on 2014-01-23 - 00:00
The deprotonation of thiols (on the
S–H bond) is widely involved in organic and bio-organic reactions.
With the aid of density functional theory (DFT) calculations, the
present study focuses on predicting the pKa’s of thiols. Efforts were first put in searching for an appropriate
computational method. To achieve this goal, the accuracy of 13 different
DFT functionals (i.e., B3LYP, BB1K, PBE, M06, M05, M06-2X, M06-L,
M05-2X, TPSS, MPW1K, MPWB1K, MPW3LYP, TPSSLYP1W) and 6 different total
electron basis sets (6-31G(d), 6-31+G(d), 6-31+G(d,p), 6-311+G(d,p),
6-311++G(d,p), 6-311++G(2df,2p)) (with DMSO solvent and SMD solvation
model) were examined. The M06-2X/6-311++G(2df,2p) (M1) method was
found to give the best performance in reproducing the reported 16
pKa’s of thiols, with a standard
deviation (SD) of about 0.5 pKa unit.
Meanwhile, the M1 method was found to be excellent in reproducing
the gas phase Gibbs free energies of 17 thiols, providing extra evidence
for the reliability of the M1 method in treating thiol systems. On
this basis, M1 was then used to predict the pKa’s of 291 thiols whose experimental pKa values remain unknown. Accordingly, the scope of pKa’s of different thiols was constructed.
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Yu, Hai-Zhu; Yang, Yi-Meng; Zhang, Liang; Dang, Zhi-Min; Hu, Guo-Hua (2016). Quantum-Chemical
Predictions of pKa’s of Thiols
in DMSO. ACS Publications. Collection. https://doi.org/10.1021/jp410274n