Infrared Spectroscopy and Born–Oppenheimer
Molecular Dynamics Simulation Study on Deuterium Substitution in the
Crystalline Benzoic Acid
Posted on 2016-12-22 - 00:00
In
this study we present complementary computational and experimental
studies of hydrogen bond interaction in crystalline benzoic acid and
its deuterated and partially deuterated derivatives. The experimental
part of the presented work includes preparation of partially deuterated
samples and measurement of attenuated total reflection (ATR)-FTIR
spectra. Analysis of the geometrical parameters and time course of
dipole moment of crystalline benzoic acid and its deuterated and partially
deuterated derivatives by Born–Oppenheimer molecular dynamics
(BOMD) enabled us to deeply analyze the IR spectra. Presented simulations
based on BOMD gave us opportunity to investigate individual motion
and its contribution to the IR spectra. The band contours calculated
using Fourier transform of autocorrelation function are in quantitative
agreement with the experimental spectra. Characterization of single
bands was carried out by “normal coordinate analysis”.
The salient point of our study is a comparison of the spectra of the
deuterated and partially deuterated crystalline benzoic acid with
that of the nondeuterated one. Furthermore, we have applied the principal
component analysis for analysis of the number of components in partially
deuterated systems. In this study, we reveal that the arrangements
of hydrogen and deuterium atoms in partially deuterated samples are
random.
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Gług, Maciej; Brela, Mateusz Z.; Boczar, Marek; Turek, Andrzej M.; Boda, Łukasz; Wójcik, Marek J.; et al. (2017). Infrared Spectroscopy and Born–Oppenheimer
Molecular Dynamics Simulation Study on Deuterium Substitution in the
Crystalline Benzoic Acid. ACS Publications. Collection. https://doi.org/10.1021/acs.jpcb.6b10617