Au Nanoparticles in Lipid Bilayers: A Comparison between
Atomistic and Coarse-Grained Models
Posted on 2017-02-27 - 00:00
The
computational study of the interaction between charged, ligand-protected
metal nanoparticles and model lipid membranes has been recently addressed
at both atomistic and coarse-grained levels. Here we compare the performance
of three versions of the coarse-grained Martini force field at describing
the nanoparticle–membrane interaction. The three coarse-grained
models differ in terms of treatment of long-range electrostatic interactions
and water polarizability. The NP–membrane interaction consists
of the transition from a metastable NP–membrane complex, in
which the NP is only partially embedded in the membrane, to a configuration
in which the NP is anchored to both membrane leaflets. All three of
the coarse-grained models provide a description of the metastable
NP–membrane complex that is consistent with that obtained using
an atomistic force field. As for the anchoring transition, the polarizable-water
Martini correctly describes the molecular mechanisms and the energetics
of the transition. The standard version of the Martini model, instead,
underestimates the free-energy barriers for anchoring and does not
completely capture the membrane deformations involved in the transition
process.
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Salassi, Sebastian; Simonelli, Federica; Bochicchio, Davide; Ferrando, Riccardo; Rossi, Giulia (2017). Au Nanoparticles in Lipid Bilayers: A Comparison between
Atomistic and Coarse-Grained Models. ACS Publications. Collection. https://doi.org/10.1021/acs.jpcc.6b12148