posted on 2018-11-14, 00:00authored bySylwia Berbeć, Robert Dec, Dmitry Molodenskiy, Beata Wielgus-Kutrowska, Christian Johannessen, Agnieszka Hernik-Magoń, Fernando Tobias, Agnieszka Bzowska, Grzegorz Ścibisz, Timothy A. Keiderling, Dmitri Svergun, Wojciech Dzwolak
Replacing water with dimethyl sulfoxide
(DMSO) completely reshapes
the free-energy landscapes of solvated proteins. In DMSO, a powerful
hydrogen-bond (HB) acceptor, formation of HBs between backbone NH
groups and solvent is favored over HBs involving protein’s
carbonyl groups. This entails a profound structural disruption of
globular proteins and proteinaceous aggregates (e.g., amyloid fibrils)
upon transfer to DMSO. Here, we investigate an unusual DMSO-induced
conformational transition of β2-amyloid fibrils from
poly-l-glutamic acid (PLGA). The infrared spectra of β2-PLGA dissolved in DMSO lack the typical features associated
with disordered conformation that are observed when amyloid fibrils
from other proteins are dispersed in DMSO. Instead, the frequency
and unusual narrowness of the amide I band imply the presence of highly
ordered helical structures, which is supported by complementary methods,
including vibrational circular dichroism and Raman optical activity.
We argue that the conformation most consistent with the spectroscopic
data is that of a PLGA chain essentially lacking nonhelical segments
such as bends that would provide DMSO acceptors with direct access
to the backbone. A structural study of DMSO-dissolved β2-PLGA by synchrotron small-angle X-ray scattering reveals
the presence of long uninterrupted helices lending direct support
to this hypothesis. Our study highlights the dramatic effects that
solvation may have on conformational transitions of large polypeptide
assemblies.