Probing the Conformational
Space of the Cannabinoid
Receptor 2 and a Systematic Investigation of DNP-Enhanced MAS NMR
Spectroscopy of Proteins in Detergent Micelles
posted on 2023-08-28, 04:46authored byJohanna Becker-Baldus, Alexei Yeliseev, Thomas T. Joseph, Snorri Th. Sigurdsson, Lioudmila Zoubak, Kirk Hines, Malliga R. Iyer, Arjen van den Berg, Sam Stepnowski, Jon Zmuda, Klaus Gawrisch, Clemens Glaubitz
Tremendous progress has been made in determining the
structures
of G-protein coupled receptors (GPCR) and their complexes in recent
years. However, understanding activation and signaling in GPCRs is
still challenging due to the role of protein dynamics in these processes.
Here, we show how dynamic nuclear polarization (DNP)-enhanced magic
angle spinning nuclear magnetic resonance in combination with a unique
pair labeling approach can be used to study the conformational ensemble
at specific sites of the cannabinoid receptor 2. To improve the signal-to-noise,
we carefully optimized the DNP sample conditions and utilized the
recently introduced AsymPol-POK as a polarizing agent. We could show
qualitatively that the conformational space available to the protein
backbone is different in different parts of the receptor and that
a site in TM7 is sensitive to the nature of the ligand, whereas a
site in ICL3 always showed large conformational freedom.