American Chemical Society
Browse

Intramolecular Interactions versus Hydration Effects on p‑Guanidinoethyl-phenol Structure and pKa Values

Download (241.69 kB)
journal contribution
posted on 2016-02-20, 11:11 authored by Najoua Derbel, Igor Clarot, Maxime Mourer, Jean-Bernard Regnouf-de-Vains, Manuel F. Ruiz-López
We analyze the structure, hydration, and pKa values of p-guanidinoethyl-phenol through a combined experimental and theoretical study. These issues are relevant to understand the mechanism of action of the tetrameric form, the antibacterial compound tetra-p-guanidinoethyl-calix­[4]­arene (Cx1). The investigated system can also be useful to model other pharmaceutical drugs bearing a guanidine function in the vicinity of an ionizable group and the effect of arginine on the pKa of vicinal ionizable residues (in particular tyrosine) in peptides. The p-guanidinoethyl-phenol monomer (mCx1) has two ionizable groups. One important particularity of this system is that it exhibits high molecular flexibility that potentially leads to enhanced stabilization in folded structures by direct, strong Coulombic interactions between the ionizable groups. The first pKa corresponding to ionization of the −OH group has experimentally been shown to be only slightly different from usual values in substituted phenols. However, because of short-range Coulombic interactions, the role of intramolecular interactions and solvation effects on the acidities of this compound is expected to be important and it has been analyzed here on the basis of theoretical calculations. We use a discrete-continuum solvation model together with quantum-mechanical calculations at the B3LYP level of theory and the extended 6-311+G­(2df,2p) basis set. Both intra- and intermolecular effects are very large (∼70 kcal/mol) but exhibit an almost perfect compensation, thus explaining that the actual pKa of mCx1 is close to free phenol. The same compensation of environmental effects applies to the second pKa that concerns the guanidinium group. Such a pKa could not be determined experimentally with standard titration techniques and in fact the theoretical study predicts a value of 14.2, that is, one unit above the pKa of the parent ethyl-guanidinium molecule.

History