posted on 2008-03-20, 00:00authored byP. B. Armentrout, M. T. Rodgers, J. Oomens, J. D. Steill
The gas-phase structures of alkali-metal cation complexes of serine (Ser) are examined using infrared multiple
photon dissociation (IRMPD) spectroscopy utilizing light generated by a free electron laser, in conjunction
with ab initio calculations. Spectra of Li+(Ser) and Na+(Ser) are similar and relatively simple, whereas
Cs+(Ser) includes distinctive new IR bands, and K+(Ser) and Rb+(Ser) exhibit intermediate behavior. Measured
IRMPD spectra are compared to spectra calculated at a B3LYP/6-311+G(d,p) level to identify the structures
present in the experimental studies. On the basis of these experiments and calculations, the only conformations
accessed for the complexes to the smaller alkali-metal cations, Li+ and Na+, are charge-solvated structures
involving tridentate coordination to the amine and carbonyl groups of the amino acid backbone and to the
hydroxyl group of the side chain, M1[N,CO,OH]. For the cesiated complex, a band corresponding to a
zwitterionic structure, ZW[CO2-], is clearly visible. K+(Ser) and Rb+(Ser) exhibit evidence of the charge-solvated analogue of the zwitterions, M3[COOH], in which the metal cation binds to the carboxylic acid
group. Calculations indicate that the relative stability of the M3[COOH] structure is very strongly dependent
on the size of the metal cation, consistent with the range of conformations observed experimentally.