posted on 2013-07-25, 00:00authored byIsaac Herrera, Mitchell A. Winnik
We present a set of model-independent differential equations to
analyze isothermal titration calorimetry (ITC) experiments. In contrast
with previous approaches that begin with specific assumptions about
the number of binding sites and the interactions among them (e.g.,
sequential, independent, cooperative), our derivation makes more general
assumptions, such that a receptor with multiple sites for one type
of ligand species (homotropic binding) can be studied with the same
analytical expression. Our approach is based on the binding polynomial
formalism, and the resulting analytical expressions can be extended
to account for any number of binding sites and any type of binding
interaction among them. We refer to the set of model-independent differential
equations to study ITC experiments as a differential binding model
(DBM). To demonstrate the flexibility of our DBM, we present the analytical
expressions to study receptors with one or two binding sites. The
DBM for a receptor with one site is equivalent to the Wiseman isotherm
but with a more intuitive representation that depends on the binding
polynomial and the dimensionless parameter c = K·MT, where K is the binding
constant and MT the total receptor concentration.
In addition, we show how to constrain the general DBM for a receptor
with two sites to represent sequential, independent, or cooperative
binding interactions between the sites. We use the sequential binding
model to study the binding interaction between Gd(III) and citrate
anions. In addition, we simulate calorimetry titrations of receptors
with positive, negative, and noncooperative interactions between the
two binding sites. Finally, we derive a DBM for titrations of receptors
with n-independent binding sites.