posted on 2014-05-13, 00:00authored byAnupriya Agrawal, Dipak Aryal, Dvora Perahia, Ting Ge, Gary S. Grest
Capturing large length scales in
polymers and soft matter while
retaining atomistic properties is imperative to computational studies
of dynamic systems. Here we present the results for a coarse-grained
model based on atomistic simulation of atactic polystyrene (PS). Similar
to previous work by Harmandaris et al. and Fritz et al., each monomer
is described by two coarse-grained beads. In contrast to these early
studies in which intramolecular potentials were based on Monte Carlo
simulations of isotactic and syndiotactic single PS molecules to capture
stereochemistry, we obtained intramolecular interactions from a single
molecular dynamics simulation of an all-atom atactic PS melt. The
nonbonded interactions are obtained using the iterative Boltzmann
inversion (IBI) scheme. This methodology has been extended to coarse
graining of poly(4-tert-butylstyrene) (PtBS) in which
an additional type of coarse-grained bead is used to describe the tert-butyl group. Similar to the process for PS, the intramolecular
interactions are obtained from a single all-atom melt simulation for
atactic PtBS.