posted on 2013-07-03, 00:00authored byAshley M. Wright, Austin A. Howard, J. Coleman Howard, Gregory S. Tschumper, Nathan I. Hammer
A comprehensive
Raman spectroscopic/electronic structure study of hydrogen bonding
by pyrimidine with eight different polar solvents is presented. Raman
spectra of binary mixtures of pyrimidine with methanol and ethylene
glycol are reported, and shifts in ν1, ν3, ν6a, ν6b, ν8a, ν8b, ν9a, ν15, ν16a, and ν16b are compared
to earlier results obtained for water. Large shifts to higher vibrational
energy, often referred to as blue shifts, are observed for ν1, ν6b, and ν8b (by as much
as 14 cm–1). While gradual blue shifts with increasing
hydrogen bond donor concentration are observed for ν6b and ν8b, ν1 exhibits three distinct
spectral components whose relative intensities vary with concentration.
The blue shift of ν1 is further examined in binary
mixtures of pyrimidine with acetic acid, thioglycol, phenylmethanol,
hexylamine, and acetonitrile. Electronic structure computations for
more than 100 microsolvated structures reveal a significant dependence
of the magnitude of the ν1 blue shift on the local
microsolvation geometry. Results from natural bond orbital (NBO) calculations
also reveal a strong correlation between charge transfer and blue
shifting of pyrimidine’s normal modes. Although charge transfer
has previously been linked to blue shifting of the X–H stretching
frequency in hydrogen bond donors, here, a similar trend in a hydrogen
bond acceptor is demonstrated.