A Very Rare Example of a Structurally Characterized
3′-GMP Metal Complex. NMR and Synthetic Assessment of Adducts
Formed by Guanine Derivatives with [Pt(L<sup>tri</sup>)Cl]Cl Complexes
with an N,N′,N″ Tridentate Ligand (L<sup>tri</sup>)
Terminated by Imidazole Rings
posted on 2017-07-06, 13:38authored byKokila Ranasinghe, Svetlana Pakhomova, Patricia A. Marzilli, Luigi G. Marzilli
[Pt(<i>N</i>(R)-1,1′-Me<sub>2</sub>dma)Cl]Cl complexes with
tridentate ligands (bis(1-methyl-2-methylimidazolyl)amine, R = H; <i>N</i>-(methyl)bis(1-methyl-2-methylimidazolyl)amine, R = Me)
were prepared in order to investigate Pt(<i>N</i>(R)-1,1′-Me<sub>2</sub>dma)<b>G</b> adducts (<b>G</b> = monodentate N9-substituted
guanine or hypoxanthine derivative). Solution NMR spectroscopy is
the primary tool for studying metal complexes of nucleosides and nucleotides
because such adducts rarely crystallize. However, [Pt(<i>N</i>(H)-1,1′-Me<sub>2</sub>dma)(3′-GMPH)]NO<sub>3</sub>·5H<sub>2</sub>O (<b>5</b>) was crystallized, allowing,
to our knowledge, the first crystallographic molecular structure determination
for a 3′-GMP platinum complex. The structure is one of only
a very few structures of a 3′-GMP complex with any metal. Complex <b>5</b> has the syn rotamer conformation, with 3′-GMP bound
by N7. All Pt(<i>N</i>(R)-1,1′-Me<sub>2</sub>dma)<b>G</b> adducts exhibit two new downfield-shifted <b>G</b> H8 signals, consistent with <b>G</b> bound to platinum by
N7 and a syn/anti rotamer mixture. Anticancer-active monofunctional
platinum(II) complexes have bulky carrier ligands that cause DNA adducts
to be distorted. Hence, understanding carrier-ligand steric effects
is key in designing new platinum drugs. Ligand bulk can be correlated
with the degree of impeded rotation of the <b>G</b> nucleobase
about the Pt–N7 bond, as assessed by the observation of rotamers.
The signals of syn and anti rotamers are connected by EXSY cross-peaks
in 2D ROESY spectra of Pt(<i>N</i>(H)-1,1′-Me<sub>2</sub>dma)<b>G</b> adducts but not in spectra of Pt(<i>N</i>(H)dpa)<b>G</b> adducts (<i>N</i>(H)dpa
= bis(2-picolyl)amine), indicating that rotamer interchange is more
facile and carrier-ligand bulk is lower in Pt(<i>N</i>(H)-1,1′-Me<sub>2</sub>dma)<b>G</b> than in Pt(<i>N</i>(H)dpa)<b>G</b> adducts. The lower steric hindrance is a direct consequence
of the greater distance of the <b>G</b> nucleobase from the
H4/4′ protons in the <i>N</i>(R)-1,1′-Me<sub>2</sub>dma carrier ligand in comparison to that from the H6/6′
protons in the <i>N</i>(H)dpa carrier ligand. Although in <b>5</b> the nucleotide is 3′-GMP (not the usual 5′-GMP)
and the <i>N</i>(H)-1,1′-Me<sub>2</sub>dma carrier
ligand is very different from those typically present in structurally
characterized Pt(II) <b>G</b> complexes, the rocking and canting
angles in <b>5</b> adhere to long-recognized trends.