posted on 2022-06-02, 21:30authored byNaomi
E. Widstrom, Minervo Perez, Erica D. Pratt, Jason L. Heier, John F. Blankenhorn, Lindsay Breidenbach, Hannah Peterson, Laurie L. Parker
Bruton’s tyrosine
kinase (BTK) is a well-documented target
for cancer therapeutics due to its role in B-cell signaling pathways.
However, inhibitor design is hindered by lack of tools to assess kinase
activity. We used in vitro phosphoproteomics to determine BTK’s
substrate preferences and applied this information to our updated
data processing pipeline, KINATEST-ID 2.1.0. This pipeline generates
a position-specific scoring matrix for BTK and a list of candidate
synthetic substrates, each given a score. Characterization of selected
synthetic substrates demonstrated a correlation between KINATEST-ID
2.1.0 score and biochemical performance in in vitro kinase assays.
Additionally, by incorporating a known terbium-chelation motif, we
adapted synthetic substrates for use in an antibody-free time-resolved
terbium luminescence assay. This assay has applications in high-throughput
inhibitor screening.