posted on 2022-01-10, 11:29authored byYue Gui, Yingdi Jin, Shigang Ruan, Guangxu Sun, Vilmalí López-Mejías, Lian Yu
The
six polymorphs of nifedipine (NIF) known at present have been
discovered over the past 50 years, and the most recent one (δ),
discovered in 2020, came from an unusual route. This polymorph is
ranked second in thermodynamic stability but evaded all previous workers
until its melt was seeded with the crystal of a foreign substance,
felodipine, in which the molecule has a different conformation from
all other NIF polymorphs known at that time. Given this unusual discovery
in the lab, we investigated whether crystal structure prediction (CSP)
can find this and other polymorphs in a “routine” search.
We show that our CSP finds all ordered polymorphs of NIF known at
present as low-energy structures (Ranks 1, 3, 4, and 43), including
the most recent one unveiled by pseudoseeding (Rank 4). NIF being
a flexible molecule, it is of interest to learn which of its many
conformers provides the best building block for crystals. An experimental
investigation of this question is limited by survival; that is, information exists on the structures that are observed
but not on those that are difficult to observe or not yet discovered.
In this regard, our “computer experiments” access the
full range of possibilities. We find that the synperiplanar (sp) conformer with respect to phenyl torsion produces
lower-energy crystals than the antiperiplanar (ap) conformer, with the most stable ap crystal
being 4 kJ/mol higher in energy than the most stable sp structure. Experimentally, the sp conformer dominates
the ap in solution and is the only conformer observed
in crystals. With respect to the ester torsions, the cis/trans conformer produces the lowest-energy crystals,
followed by the cis/cis conformer
and by the trans/trans conformer.
Experimentally, five of the six known polymorphs contain the cis/trans conformer, one contains the cis/cis conformer, and none contain the trans/trans conformer. Overall, the CSP
is remarkably successful in predicting the polymorphs of NIF in spite
of its complex conformational space and provides a quantitative assessment
of the relative costs of employing different conformers as units of
crystal building.